SCI Indexed Journal Papers


Akın, O., Dinleyici, M. S., “An All-Optical Switching Based on Resonance Breaking with a Transient Grating ” IEEE/OSA Journal of Lightwave Technology , Vol. 28, No.23, pp.3470-3477, 2010.

A. Holzapfel, Y. Stylianou, A.C. Gedik, B. Bozkurt, 2010, “Three Dimensions Of Pitched Instrument Onset Detection”, IEEE Trans. on Audio, Speech and Language Procesing, vol.18/6, pp.1517-1527.

T. Drugman, B. Bozkurt, T. Dutoit, 2010, ” Glottal Source Estimation Using an Automatic Chirp Decomposition”, in ” Advances in Nonlinear Speech Processing” LNCS 5933, 35-42, edited by R. Goebel, J. Siekmann, and W.Wahlster, DOI: 10.1007/978-3-642-11509-7_5, ISBN: 3-642-11508-X, Springer, NewYork.

Cek ME, Ozgoren M, Savaci FA, Continuous time wavelet entropy of auditory evoked potentials, COMPUTERS IN BIOLOGY AND MEDICINE, Volume: 40, Issue: 1, Pages: 90-96, Published: JAN 2010

A. C. Gedik, B. Bozkurt, 2010, “Pitch Frequency Histogram Based Music Information Retrieval for Turkish Music “, Signal Processing, vol.10, pp.1049-1063.


M. Emre Cek, F. Acar Savaci, 2009, “Stable non-Gaussian noise parameter modulation in digital communication”. ELECTRONICS LETTERS Volume: 45 Issue: 24 Pages: 1256-1257.

A. C. Gedik, B. Bozkurt, 2009,”Evaluation of the Makam Scale Theory of Arel for Music Information Retrieval on Traditional Turkish Art Music”, Journal of New Music Research, 38:2,pp. 103-116.

B. Bozkurt, O. Yarman, M.K.Karaosmanoglu, C. Akkoc, 2009, “Weighing Diverse Theoretical Models On Turkish Maqam Music Against Pitch Measurements: A Comparison Of Peaks Automatically Derived From Frequency Histograms With Proposed Scale Tones”, Journal of New Music Research, 38:1,pp. 45-70.


M. A. Altinkaya, E. Anarım, B. Sankur,  Phase Dependence Mitigation For Autocorrelation-Based Frequency Estimation,  Digital Signal Processing, C. 18, No:2, s.249-266, 2008.

B. Özbakis and A. Kuştepeli, “The Resonant Behavior of the Fibonacci Fractal Tree Antennas,” Microwave and Optical Tech. Lett., vol. 50, pp. 1046-1050, April 2008.

T. F. Bechteler, A. Kustepeli and S. A. Bechteler, “Design of Coupling Structures for Groove Guide Resonators,” Microwave and Optical Tech. Lett., vol. 50, pp. 1406-1410, May 2008.

B. Özbek, Didier Le Ruyet, Hajer Khanfir, “Performance evaluation of Multicast MISO-OFDM systems”, Annals of Telecommunications, vol.5-6, pp.295-305, June 2008.

C. Pladdy, S. Özen, M. Fimoff, S.M. Nereyanuru,M. Zoltowski,”Taylor series approximation of semi-blind BLUE channel estimates with applications to DTV”, Inverse Problems in Science and Engineering, vol 16, issue 3, pp.303-324, 2008.

B. Bozkurt, 2008, “An automatic pitch analysis method for Turkish maqam music”, Journal of New Music Research, Volume 37, Issue 1, pages 1 – 13.

N. d‘Alessandro, O. Babacan, B. Bozkurt, T. Dubuisson, A. Holzapfel, L. Kessous, A. Moinet, M. Vlieghe, 2008, “RAMCESS 2.X framework -expressive voice analysis for realtime and accurate synthesis of singing”, Journal on Multimodal User Interfaces, 2008.( doi: 10.1007/s12193-008-0010-4).

C. d’Alessandro, B. Bozkurt, B. Doval, T. Dutoit, N. Henrich, V. N. Tuan, N. Sturmel 2008, “Phase-Based Methods for Voice Source Analysis”, in “Advances in Nonlinear Speech Processing” LNCS 4885, pp 1-27, edited by Chetouani, M.; Hussain, A.; Gas, B.; Milgram, M.; Zarader, J.-L., Springer Verlag. ISBN 978-3-540-77346-7. (doi: 10.1007/978-3-540-77347-4_1).

E. Tatlicioglu , “Control of Nonlinear Mechatronic Systems,” VDM Verlag Dr.Mueller e.K., Germany, 2008 (ISBN-13: 978-3836457095).

E. Tatlicioglu , D. Braganza, T. Burg, and D. Dawson, “Adaptive Control of Redundant Robot Manipulators with Sub-task Extensions,” Robotica, accepted to appear, 2008.

E. Tatlicioglu , I. Walker, and D. Dawson, “Dynamic Modeling for Planar Extensible Continuum Robot Manipulators,” Intl. Journal of Robotics and Automation, accepted to appear, 2008.

E. Tatlicioglu, M. L. McIntyre, D. M. Dawson, I. D. Walker, “Adaptive Nonlinear Tracking Control of Kinematically Redundant Robot Manipulators,” Intl. Journal of Robotics and Automation, Vol. 23, no. 2, pp. 98–105, 2008.

N. Nath, E. Tatlicioglu, and D. Dawson, “Teleoperation with Kinematically Redundant Robot Manipulators with Sub-Task Objectives,” Robotica, 2008, accepted to appear.

F. Acar Savacı, Nalan Özkurt, “The system modelling and circuit implementation from time-frequency domain signal specifications” AEU: International Journal of Electronics and Communications 62 (2008) 565-575.


A.S.A.Bechteler and T.F. Bechteler, “Switchless Bidirectional Amplifier for Wireless Communication Systems” Microwave and Optical Technology Letters, V:49, No:8, 1888-1890,August 2007.

B. Bozkurt, T. Dutoit, L. Couvreur, “Spectral analysis of speech signals using chirp group delay”,in “Progress in Nonlinear Speech Processing” LNCS 4391, pp 41-57, edited by Y. Stylianou, M. Faundez-Zanuy, A. Eposito Springer Verlag. ISBN: 978-3-540-71503-0, 2007.

Mustafa A. Altinkaya, Emin Anarım, Bülent Sankur “Phase Dependence Mitigation For Autocorrelation-Based Frequency Estimation” Digital Signal Process.  (2007), doi:10.1016/ j.dsp.2007.02.004.

Z. Tüfekci, “Convolutional Bias Removal Based on Normilizing the Filterbank Spectral Magnitude”, IEEE signal Processing Letters,  no: 14-7, sayfa 485-488, 2007.

Gormley, M., Dampier, W., Ertel, A., Karaçalı, B., Tözeren, A., “Prediction potential of candidate biomarker sets identified and validated on gene expression data from multiple datasets,” BMC Bioinformatics, 8(415) 2007.

Karaçalı, B., Vamvakidou, A.P., Tözeren, A., “Automated recognition of cell phenotypes in histology images based on membrane- and nuclei-targeting biomarkers,” BMC Medical Imaging, 7(7) 2007.

Karaçalı, B., Tözeren, A., “Automated detection of regions of interest for tissue microarray experiments: an image texture analysis,” BMC Medical Imaging, 7(2) 2007.

Karaçalı, B., “Information theoretic deformable registration using local image information,” International Journal of Computer Vision, (72)3, 219-237 2007.


B. Özbek, D. Le Ruyet, “Low complexity ZF receivers for SFBC-OFDM  in broadband       wireless channels”, IEE Electronics Letters, cilt:42, no.8, s.479-481.

Ş. Ozan, Ş. Gümüştekin, “A Case Study on Logging Visual Activities: Chess Game”, Lecture Notes in Artificial Intelligence,  Springer, Vol. 3949 sf 1-10.

S. Günel, F. A. Savacı, “Determination of Stationary State Densities of Stochastic Nonlinear Dynamical Systems”, International Journal of Engineering Science  44, (2006)-1432-1447.

F. A. Savacı, S. Günel, “Harmonic Balance Analysis of Generalized Chua’s Circuit”, International Journal of Bifurcation and Chaos.V.16,N:8 (2006) 2325-2332.

N. Özkurt, F. A. Savacı, “Reconstruction of Nonstationary Signals Along the Wavelet Ridges”, International Journal of Bifurcation and Chaos, Vol. 16, Issue 1, pp. 191-198, January 2006.

Z. Tufekci, John N. Gowdy, Sabri Gurbuz and Eric Patterson, “Applied mel-frequency discrete wavelet coefficients and parallel model compensation for noise-robust speech recognition”, Speech Communication, Volume 48, Issue 10, October 2006, Pages 1294-1307.

B. Mocan, S. Dinleyici, “A Novel All-Optical Routing Architecture for Optical Packet Switched Networks”, Photonic Network Communications, Vol 11, pp. 77-86, 2006.

B. Özbek, D. Le Ruyet, H. Khiari, “Adaptive resource allocation for Multicast OFDM  systems with multiple transmit antennas”, Proc. of IEEE ICC06, Haziran 2006, Istanbul.

C. Pladdy, S. Özen, S. M. Nereyanuru, M. Fimoff, M. D. Zoltowski “Semiblind BLUE Channel Estimation With Applications to Digital Television” IEEE Transactions on Vehicular Technology Vol. 55, No. 6, Nov. 2006.

Xue, Z., Shen, D., Karaçalı, B., Stern, J., Rottenberg D. ve Davatzikos, C., “Simulating Deformations of MR Brain Images for Validation of Atlas-based Segmentation and Registration Algorithms”, NeuroImage, 33, 855-866, 2006.

Karaçalı, B. Davatzikos, C., “Simulation of tissue atrophy using a topology preserving transformation model,” IEEE Transactions on Medical Imaging, 25(5), 649-652, 2006.

M. McIntyre, W. Dixon, D. Dawson, and E. Tatlicioglu , “Passive Coordination of Nonlinear Bilateral Teleoperated Manipulators,” Robotica, 24(4), pp 463-476, 2006.


N. Özkurt, F. A. Savacı, “Determination of Wavelet Ridges of Nonstationary Signals by Singular Value Decomposition”, IEEE Trans. Circuits and Systems, Vol 52, No: 8, pp. 480-485, August 2005.

N. Özkurt, F. A. Savacı, M. Gündüzalp, “The Circuit Realization of Mexican Hat Wavelet Function”, AEU: International Journal of Electronics and Communications, Volume 59, Issue 6, pp. 370-373, 15 September 2005.

N. Özkurt, F. A. Savacı, “The Implementation of Nonlinear Dynamical Systems with Wavelet Network”, AEU: International Journal of Electronics and Communications (available online from 4 June  2005).

Lecture Notes in Artificial Intelligence (LNAI) 3949, 14th Turkish Symposium, TAINN 2005, Revised Selected Papers, Edited by: F. A. Savacı.

Didier Le Ruyet, Berna Özbek, “MIMO and Space Time Codes”, Journal on Electrical and Electronics (REE), vol. 4, April 2005.

Berna Özbek, Reyat Yılmaz, “Adaptive Channel Estimation for STBC-OFDM Systems”, İstanbul University Journal of Electrical and Electronics Engineering, vol.5, no.1, 2005.

Edward D. Lipson, Andrzej Krol, Mehmet Z. Unlu, Ioana L. Coman, James A. Mandel, Wei Lee, David H. Feiglin, “Development of Deformable Model For 3D Nonrigid Breast Image Registration for Improved Breast Cancer Diagnosis” International Journal of Scientific Research, 2005.

Th.F. Bechteler,”Analysis of Excitations for a Groove Guide Resonator at 10 GHz by Means of FTDT Method”, International Journal of Infrared and Millimeter Waves, 26(9), pp. 819-830, 2005.

B. Bozkurt, B. Doval, C. D’Alessandro, T. Dutoit, 2005, ” Zeros of Z-Transform (ZZT) representation with application to source-filter separation in speech “, IEEE Signal Processing Letters, vol. 12, no. 4, pp.344-347.

B. Bozkurt, F. Severin, T. Dutoit, 2005, “An Algorithm to Estimate Anticausal Glottal Flow Component from Speech Signals”, LNAI 3445, pp 338-343, edited by G. Chollet, A. Esposito, M. Faundez-Zanuy, and M. Marinaro, Springer Verlag.



A. S. A. Bechteler, L. Sevgi “Design and Numerical Simulation of a Semi-Symmetrical Groove Type Resonator at Millimeter Waves”,IEEE Microwave Magazine , September 2004.

Karaçalı, B.  Davatzikos, C., “Estimating topology preserving and smooth displacement fields,” IEEE Transactions on Medical Imaging, 23(7), 868-880, 2004.

Karaçalı, B.  Snyder, W., “Noise reduction in surface reconstruction from a given gradient field,” International Journal of Computer Vision, 60(1), 25-44, 2004.

Karaçalı, B., Ramanath, R. ve Snyder, W., “A comparative analysis of structural risk minimization by support vector machines and nearest neighbor rule,” Pattern Recognition Letters, 25(1), 63-71, 2004.



F. A. Savacı, M. F. Yalçın, C. Güzeliş, “Steady-State Analysis of Nonlinearly Coupled Chua’s Circuits with Periodic Inputs”, International Journal of Bifurcation and Chaos, pp. 3395-3407, Vol. 13, No. 11, 2003.

M. S. Dinleyici, “An Experimental Work on Optical Component based on D-Fiber/Slab Evanescent Coupling Structure”, Optical and Quantum Electronics, Vol. 35 (1), 2003, pp. 75-84.

Lao, Z., Shen, D., Karaçalı, B., Resnick, S. M. ve Davatzikos, C., “Morphological classification of brains via high dimensional shape transformations and machine learning methods,” NeuroImage, 21(1), 46-57, 2003.

Karaçalı, B. ve Snyder, W., “Reconstructing discontinuous surfaces from a given gradient field using partial integrability,” Computer Vision and Image Understanding, 92(1), 78-111, 2003.

Karaçalı, B. ve Krim, H., “Fast minimization of structural risk by nearest neighbor method,” IEEE Trans. on Neural Networks, 14(1), 127-137, 2003.


N. Özkurt, F. A. Savacı, M. Gündüzalp, “The Circuit Implementation of a Wavelet Function Approximator”, Journal of the Analog Integrated Circuits and Signal Processing, pp. 171-175, Volume 32, Issue 2, August 2002.

Proceedings of the 2002 Workshop on Nonlinear Dynamics of Electronic Systems, Edited by: F. A. Savacı, S. Günel, I. İ.Yapalı, N. Özkurt, ISBN 975-6590-01-7.

M. A. Altinkaya, H. Delic, B. Sankur, E. Anarim, “Subspace-Based Frequency Estimation of Sinusoidal Signals in Alpha-Stable Noise”, Signal Processing, Vol. 82, No. 12, pp 1807-1827, 2002.


M. S. Dinleyici, ” Device Length Requirement in Slab/Fiber Evanescent Coupler” Fiber and Integrated Optics, Vol. 19, No. 1, 2000, pp.87-95.

Proceedings of the 9th Turkish Symposium on Artificial Intelligence and Neural Networks, 21-23 June 2000, Izmir, Edited by M Gündüzalp, C. Güzeliş, F. A. Savacı, ISBN 975-97201-0-8.

Departmental faculty member names are remarked in bold font styles.