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2018 International Conference on Artificial Intelligence and Data Processing …, 2018.
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Operations Research Proceedings, 2017 , pp. 737–743, 2018.
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RAIRO-OPERATIONS RESEARCH, 50 (2), pp. 341–349, 2016.
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Journal of Bioinformatics and Computational Biology, 13 (6), pp. 1550020–1550020, 2015.
Incorporating triple resonance experiment data into NVR for NMR protein structure-based assignments Journal Article
2014 22nd Signal Processing and Communications Applications Conference (SIU …, 2014.
An ant colony optimization approach for solving the nuclear magnetic resonance structure based assignment problem Journal Article
Proceedings of the 15th annual conference companion on Genetic and …, 2013.
Distinguishing the type of NOE for NMR protein structure-based assignments Journal Article
2013 21st Signal Processing and Communications Applications Conference (SIU …, 2013.
A tabu search approach for the NMR protein structure-based assignment problem Journal Article
IEEE/ACM transactions on computational biology and bioinformatics 9 (6 …, 2012.
Incorporating amino acid typing into nuclear magnetic resonance protein structure-based assignments Journal Article
Proteom. Bioinform, 5 , pp. 116–121, 2012.
NVR-BIP: nuclear vector replacement using binary integer programming for NMR structure-based assignments Journal Article
The Computer Journal, 54 (5), pp. 708–716, 2011.
Developing a scoring function for NMR structure-based assignments using machine learning Journal Article
Computer and Information Sciences, pp. 87–90, 2011.
Using amino acid typing to improve the accuracy of NMR structure based assignments Journal Article
2010 5th International Symposium on Health Informatics and Bioinformatics …, 2010.
Structure-based protein NMR assignments using native structural ensembles Journal Article
Journal of Biomolecular NMR, 40 (4), pp. 263–276, 2008.
Using stochastic roadmap simulation to predict experimental quantities in protein folding kinetics: folding rates and phi-values Journal Article
Journal of Computational Biology, 14 (5), pp. 578–593, 2007.
Predicting experimental quantities in protein folding kinetics using stochastic roadmap simulation Journal Article
Annual International Conference on Research in Computational Molecular …, 2006.
Stochastic conformational roadmaps for computing ensemble properties of molecular motion Journal Article
Algorithmic Foundations of Robotics V, pp. 131–147, 2004.
Stochastic roadmap simulation: An efficient representation and algorithm for analyzing molecular motion Journal Article
Journal of Computational Biology 10 (3-4), pp. 257–281, 2003.
Stochastic roadmap simulation for the study of ligand-protein interactions Journal Article
Bioinformatics 18 (suppl_2), S18-S, 26 , 2002.
Studying protein-ligand interactions with stochastic roadmap simulation Journal Article
Bioinformatics, 18 (2), pp. 18–26, 2002.
Capturing molecular energy landscapes with probabilistic conformational roadmaps Journal Article
Proceedings 2001 ICRA. IEEE International Conference on Robotics and …, 2001.
An optimal procedure for gap closing in whole genome shotgun sequencing Journal Article
Proceedings of the fifth annual international conference on Computational …, 2001.